When a dollar makes a BWT

نویسندگان

چکیده

The Burrows-Wheeler-Transform (BWT) is a reversible string transformation which plays central role in text compression and fundamental many modern bioinformatics applications. BWT permutation of the characters, general better compressible allows to answer several different query types more efficiently than original string. It easy see that not every image, exact characterizations images are known. We investigate related combinatorial question. In applications, sentinel character dollar added mark end string, thus ending with contains exactly one dollar-character. Given w, we ask positions, if any, dollar-character can be inserted turn w into image word dollar. show this depends only on standard present O(n log n)-time algorithm for identifying all such improving naive quadratic time algorithm. also give characterization positions develop bounds their number value. This an extended version [Giuliani et al. ICTCS 2019].

برای دانلود باید عضویت طلایی داشته باشید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

When a Surgical Colleague Makes an Error.

Professionalism requires that doctors acknowledge their errors and figure out how to avoid making similar ones in the future. Over the last few decades, doctors have gotten better at acknowledging mistakes and apologizing to patients when a mistake happens. Such disclosure is especially complicated when one becomes aware of an error made by a colleague. We present a case in which consultant sur...

متن کامل

When unity makes strength

In metastatic melanoma patients, circulating natural killer (NK) cells display phenotypic and functional alterations that appear to correlate with the duration of stage IV disease. Moreover, specific NK cell subsets that exhibit robust tumoricidal functions upon activation by cytokines infiltrate the diseased lymph nodes of these patients. These data suggest that NK cells may be harnessed for t...

متن کامل

Emergent Information . When a Difference Makes a Differ -

Gregory Bateson’s famous saying about information can be looked upon as a good foundation of a Unified Theory of Information (UTI). Section one discusses the hard and the soft science approaches to information. It will be argued that a UTI approach needs to overcome the divide between these approaches and can do so by adopting an historical and logical account of information. Section two gives ...

متن کامل

When sex makes you sick.

Sex and parasites are two of the most important forces in evolution, shaping everything from the appearance of organisms (sex, by favoring the evolution of ornaments and weapons) to their physiological functioning (parasites, via selection for host defenses). They have been studied both separately and together, with parasite–sex interactions similarly featuring in a wide range of areas in biolo...

متن کامل

Project Effort Estimation: Or, When Size Makes a Difference

The motivation for this work is derived from the current interest in speeding up development schedules. A key implication of the shift to more rapid development methods is the growing emphasis on fixed time and fixed effort delivered during such projects. However there appears to be little work that addresses the impacts of dealing with bound effort levels. The result of binding time and effort...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Theoretical Computer Science

سال: 2021

ISSN: ['1879-2294', '0304-3975']

DOI: https://doi.org/10.1016/j.tcs.2021.01.008